STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0675KEGG: mhu:Mhun_0450 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase. (181 aa)    
Predicted Functional Partners:
Mboo_0672
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: mhu:Mhun_0453 thiamine pyrophosphate enzyme-like TPP-binding.
 
 0.998
Mboo_0673
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: mhu:Mhun_0452 pyruvate flavodoxin/ferredoxin oxidoreductase-like.
 
 0.996
Mboo_0674
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mhu:Mhun_0451 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate.
 
 
 0.996
Mboo_0171
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: sat:SYN_00692 pyruvate synthase alpha chain.
 
 0.985
Mboo_0204
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: sat:SYN_00692 pyruvate synthase alpha chain.
 
 0.985
Mboo_0170
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: sat:SYN_00691 pyruvate synthase subunit.
 
 0.982
Mboo_0205
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: sat:SYN_00691 pyruvate synthase subunit.
 
 0.982
Mboo_0729
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: mhu:Mhun_0093 thiamine pyrophosphate enzyme-like TPP-binding.
  
 0.946
Mboo_2090
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; KEGG: mhu:Mhun_2993 thiamine pyrophosphate enzyme-like TPP-binding.
  
 0.946
Mboo_0173
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mhu:Mhun_2393 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate.
 
 
 0.924
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.