STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0765KEGG: mhu:Mhun_1024 phosphate transport regulator-like. (209 aa)    
Predicted Functional Partners:
Mboo_0764
PFAM: phosphate transporter; KEGG: mhu:Mhun_1023 phosphate transporter.
 
  
 0.976
Mboo_0762
PFAM: phosphate transporter; KEGG: sat:SYN_00387 phosphate/sulphate permease.
 
  
 0.951
Mboo_0763
PFAM: protein of unknown function DUF47; KEGG: mhu:Mhun_1022 protein of unknown function DUF47.
 
    
0.619
Mboo_1918
TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mhu:Mhun_2982 phosphate ABC transporter, permease protein PstC.
     
 0.516
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
  
 0.477
Mboo_2184
PFAM: chromosome segregation and condensation protein ScpA; KEGG: mhu:Mhun_0026 chromosome segregation and condensation protein ScpA.
  
    0.434
Mboo_1153
PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: mmp:MMP1135 flavodoxin:beta-lactamase-like.
  
    0.423
Mboo_2086
PFAM: beta-lactamase domain protein; KEGG: mhu:Mhun_0795 beta-lactamase-like.
  
    0.423
Mboo_0766
PFAM: Quinolinate phosphoribosyl transferase; KEGG: afu:AF0821 nicotinate phosphoribosyltransferase.
       0.419
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn).
  
    0.410
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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