STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0806Sodium/hydrogen exchanger; PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: mhu:Mhun_2803 sodium/hydrogen exchanger. (666 aa)    
Predicted Functional Partners:
Mboo_0721
PFAM: Resolvase, N-terminal domain; KEGG: mbu:Mbur_0557 resolvase-like protein.
 
    0.694
Mboo_1636
PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: mhu:Mhun_0171 iron-containing alcohol dehydrogenase.
  
  
 0.658
Mboo_1286
PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mba:Mbar_A2639 aldo/keto reductase.
  
    0.648
Mboo_0278
PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: mhu:Mhun_2730 DEAD/DEAH box helicase-like.
  
    0.646
kdpC
Potassium-transporting ATPase, A subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex; Belongs to the KdpA family.
  
  
 0.634
Mboo_0206
PFAM: TrkA-C domain protein; KEGG: afu:AF1244 putative TrkA domain protein.
 
  
 0.615
Mboo_1683
PFAM: protein of unknown function DUF1624; KEGG: mba:Mbar_A1147 hypothetical protein.
  
    0.598
Mboo_1627
KEGG: mtp:Mthe_1696 hypothetical protein.
   
    0.594
Mboo_2237
KEGG: mhu:Mhun_2509 hypothetical protein.
   
    0.591
Mboo_0910
KEGG: mhu:Mhun_0805 cytochrome oxidase, subunit I, putative.
   
    0.588
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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