STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0970TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: mac:MA3477 ferrous iron transport protein B. (666 aa)    
Predicted Functional Partners:
Mboo_0972
PFAM: FeoA family protein; KEGG: mbu:Mbur_0777 FeoA.
 
  
 0.988
Mboo_0971
PFAM: FeoA family protein; KEGG: mba:Mbar_A1451 hypothetical protein.
  
  
 0.971
Mboo_0968
Hypothetical protein.
       0.838
Mboo_0969
KEGG: mbu:Mbur_0780 hypothetical protein.
       0.838
Mboo_0973
PFAM: iron dependent repressor; KEGG: afu:AF2395 iron-dependent repressor.
  
  
 0.637
Mboo_1982
KEGG: mac:MA2721 serine O-acetyltransferase / hypothetical protein (multi-domain); TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; protein of unknown function DUF59.
     
 0.628
Mboo_0794
PFAM: Ferritin, Dps family protein; KEGG: tko:TK1999 ferritin-like protein.
     
 0.517
Mboo_0251
PFAM: transferase hexapeptide repeat containing protein; KEGG: mhu:Mhun_2143 transferase hexapeptide repeat.
  
    0.498
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.463
Mboo_0260
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mhu:Mhun_0461 ABC transporter related.
     
 0.454
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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