STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1008Signal transduction histidine kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation/phosphoacceptor; KEGG: ana:all2239 two-component hybrid sensor and regulator. (347 aa)    
Predicted Functional Partners:
Mboo_1007
PFAM: response regulator receiver; GAF domain protein; KEGG: mth:MTH440 sensory transduction regulatory protein.
   
 0.928
Mboo_0327
Putative PAS/PAC sensor protein; KEGG: mag:amb3654 hypothetical 1041 kDa protein in HypE 3'region; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase, CheR-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
      0.829
Mboo_1808
KEGG: mth:MTH457 sensory transduction regulatory protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; histidine kinase A domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein.
   
 0.816
Mboo_1517
PFAM: response regulator receiver; KEGG: mbu:Mbur_1557 response regulator receiver.
   
 0.774
Mboo_2407
PFAM: response regulator receiver; KEGG: mhu:Mhun_1724 response regulator receiver domain protein (CheY-like).
   
 0.766
Mboo_1497
KEGG: mth:MTH440 sensory transduction regulatory protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
   
 0.752
Mboo_1912
PFAM: response regulator receiver; KEGG: mhu:Mhun_0118 putative PAS/PAC sensor protein.
   
 0.748
Mboo_0900
PFAM: response regulator receiver; KEGG: lbl:LBL_2788 histidine kinase of a two-component regulator system.
   
 0.740
Mboo_1807
TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; PAS fold domain protein; KEGG: mth:MTH440 sensory transduction regulatory protein.
   
 0.736
Mboo_1813
PFAM: response regulator receiver; KEGG: mth:MTH1764 sensory transduction regulatory protein.
   
 0.725
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.