STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1021PFAM: protein of unknown function DUF74; KEGG: pto:PTO0347 hypothetical protein; Belongs to the UPF0145 family. (120 aa)    
Predicted Functional Partners:
Mboo_1018
PFAM: transcriptional regulator PadR family protein; KEGG: mhu:Mhun_1327 transcriptional regulator, PadR-like family.
       0.587
Mboo_1019
KEGG: mhu:Mhun_1529 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.571
Mboo_1020
TIGRFAM: daunorubicin resistance ABC transporter, inner membrane subunit B; PFAM: ABC-2 type transporter; KEGG: mhu:Mhun_1528 ABC-2.
       0.562
Mboo_0260
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mhu:Mhun_0461 ABC transporter related.
  
  
 0.536
Mboo_0259
PFAM: SufBD protein; KEGG: mhu:Mhun_2849 SufBD.
  
  
 0.434
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.