STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Mboo_1146Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family. (455 aa)    
Predicted Functional Partners:
Mboo_1145
KEGG: cac:CAC0256 nitrogenase molybdenum-iron protein, alpha chain (nitrogenase component I) gene nifD; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase, component 1.
 
 0.999
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 0.991
Mboo_1147
KEGG: cac:CAC0258 nitrogenase iron-molibdenum cofactor biosinthesis protein, gene nifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase, component 1; Belongs to the NifD/NifK/NifE/NifN family.
  
0.979
Mboo_2081
PFAM: oxidoreductase/nitrogenase, component 1; KEGG: mac:MA1220 nitrogenase associated protein N.
 
 
 
0.977
Mboo_2010
Nitrogenase; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpa:RPA2637 possible nitrogenase iron-molybdenum protein subunit NifK homolog; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 
0.972
Mboo_2004
Nitrogenase; PFAM: oxidoreductase/nitrogenase, component 1; KEGG: rpa:RPA2636 possible nitrogenase molybdenum-iron protein alpha chain (nitrogenase component I) (dinitrogenase).
 
0.971
Mboo_2083
Nitrogenase; PFAM: NifH/frxC-family protein; KEGG: mhu:Mhun_0793 nitrogenase; Belongs to the NifH/BchL/ChlL family.
 
 0.971
nifH-2
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
  
 0.966
Mboo_1143
PFAM: nitrogen regulatory protein P-II; KEGG: det:DET1157 nitrogen regulatory protein P-II.
 
 
 0.961
Mboo_0665
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mhu:Mhun_0813 radical SAM.
  
 0.952
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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