STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1197PFAM: PEGA domain protein; KEGG: mhu:Mhun_3130 peptidase S8 and S53, subtilisin, kexin, sedolisin. (364 aa)    
Predicted Functional Partners:
Mboo_1198
PFAM: beta-lactamase domain protein; amino acid-binding ACT domain protein; KEGG: mma:MM0792 hypothetical protein.
       0.526
Mboo_1192
KEGG: deh:cbdb_A481 hypothetical protein.
       0.508
Mboo_1193
PFAM: ferredoxin; KEGG: chy:CHY_1224 iron-sulfur cluster binding protein.
       0.508
Mboo_1194
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; Fe-S cluster domain protein; KEGG: chy:CHY_1223 acetyl-CoA decarbonylase/synthase complex subunit gamma.
       0.508
Mboo_1195
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit; KEGG: dsy:DSY1648 carbon monoxide dehydrogenase/acetyl-CoA synthase delta subunit.
       0.508
Mboo_1196
KEGG: chy:CHY_1222 acetyl-CoA decarbonylase/synthase complex subunit beta; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit.
       0.508
Mboo_1191
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mth:MTH1711 nitrogenase reductase related protein.
       0.481
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.