STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1290KEGG: mhu:Mhun_1003 hypothetical protein. (468 aa)    
Predicted Functional Partners:
Mboo_1289
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mhu:Mhun_1004 ABC transporter related.
       0.838
Mboo_1291
PFAM: protein of unknown function UPF0118; KEGG: mba:Mbar_A3067 hypothetical protein.
       0.613
Mboo_1292
Hypothetical protein.
       0.568
Mboo_1286
PFAM: aldo/keto reductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mba:Mbar_A2639 aldo/keto reductase.
       0.484
Mboo_1287
PFAM: beta-lactamase domain protein; KEGG: mhu:Mhun_0673 beta-lactamase-like.
       0.484
Mboo_1288
PFAM: regulatory protein, TetR; KEGG: mma:MM1614 transcriptional regulator, TetR family.
       0.484
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.