STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1303PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mma:MM2387 cobalt transport ATP-binding protein. (481 aa)    
Predicted Functional Partners:
Mboo_1302
PFAM: cobalt transport protein; KEGG: mac:MA1419 cobalt transport protein.
 
 
 0.989
Mboo_1304
KEGG: mma:MM2386 hypothetical protein.
     0.908
Mboo_2277
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2015 ABC transporter ATP-binding protein.
     
0.901
Mboo_1640
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mac:MA4022 cobalt transport protein.
 
 
 0.896
Mboo_1295
TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mma:MM0463 cobalt transport protein.
  
 
 0.872
Mboo_1788
PFAM: BioY protein; KEGG: mhu:Mhun_3185 BioY protein.
 
 
 
 0.823
Mboo_1637
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mba:Mbar_A2565 cobalamin biosynthesis protein.
 
 
 0.783
Mboo_1638
KEGG: mba:Mbar_A2564 cobalamin biosynthesis protein.
 
 
 0.773
cbiM
Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 
 0.742
Mboo_1305
Hypothetical protein.
       0.727
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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