STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1326TIGRFAM: putative adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: mhu:Mhun_1167 adenylyl cyclase CyaB, putative. (175 aa)    
Predicted Functional Partners:
ndk
Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
    
  0.902
Mboo_1709
TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: mhu:Mhun_2811 ribonucleoside-triphosphate reductase, anaerobic.
     
  0.900
moaA
Putative molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
    
  0.819
mptA
Protein of unknown function DUF198; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
    
  0.803
Mboo_1327
PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: mhu:Mhun_1166 peptidylprolyl isomerase, FKBP-type.
       0.693
mat
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP; Belongs to the AdoMet synthase 2 family.
 
     0.558
Mboo_0158
SMART: helix-turn-helix domain protein; KEGG: mhu:Mhun_0152 transcriptional regulator, XRE family.
 
     0.526
Mboo_0609
PFAM: Mg2+ transporter protein, CorA family protein; KEGG: cac:CAC1852 magnesium and cobalt transport protein.
 
    0.515
Mboo_2320
PFAM: Protein of unknown function DUF460; KEGG: mhu:Mhun_2604 protein of unknown function DUF460.
  
     0.461
Mboo_2062
PFAM: Radical SAM domain protein; KEGG: mhu:Mhun_0784 radical SAM.
  
     0.451
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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