STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1416KEGG: mhu:Mhun_0667 hypothetical protein. (379 aa)    
Predicted Functional Partners:
Mboo_1415
PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mhu:Mhun_0666 triphosphoribosyl-dephospho-CoA protein.
 
     0.954
Mboo_1414
PFAM: protein of unknown function DUF447; KEGG: mhu:Mhun_0665 protein of unknown function DUF447.
       0.942
Mboo_0240
Putative metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / TsaD family.
  
  
 0.820
cofD
LPPG; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP.
 
     0.736
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
 
 
 0.700
Mboo_1418
KEGG: mhu:Mhun_0669 hypothetical protein.
     
 0.688
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.682
Mboo_1586
PFAM: phosphoesterase, RecJ domain protein; RNA binding S1 domain protein; nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: mhu:Mhun_1717 phosphoesterase, RecJ-like.
  
    0.667
Mboo_0249
PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: mhu:Mhun_2859 oligosaccharyl transferase, STT3 subunit.
  
     0.658
Mboo_1209
PFAM: Oligosaccharyl transferase, STT3 subunit; KEGG: mhu:Mhun_2859 oligosaccharyl transferase, STT3 subunit.
  
     0.654
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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