STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1434PFAM: natural resistance-associated macrophage protein; KEGG: sfu:Sfum_2395 natural resistance-associated macrophage protein. (422 aa)    
Predicted Functional Partners:
Mboo_1436
MgtE intracellular region; PFAM: CBS domain containing protein; MgtE intracellular region; KEGG: sfu:Sfum_2396 CBS domain containing protein.
 
  
 0.941
Mboo_1167
PFAM: ABC-3 protein; KEGG: bxe:Bxe_A0715 ABC Mn2+/Zn2+ transporter, inner membrane subunit.
  
  
 0.770
Mboo_1435
Hypothetical protein.
       0.732
Mboo_1169
PFAM: periplasmic solute binding protein; KEGG: fra:Francci3_2479 periplasmic solute binding protein.
 
  
 0.664
Mboo_1437
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mtp:Mthe_0487 methyltransferase type 11.
     
 0.643
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.634
Mboo_1918
TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mhu:Mhun_2982 phosphate ABC transporter, permease protein PstC.
     
 0.596
Mboo_1168
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pac:PPA0616 ABC transporter, ATP-binding protein.
  
  
 0.572
Mboo_1170
PFAM: iron dependent repressor; KEGG: mba:Mbar_A0992 iron dependent repressor.
 
  
 0.535
Mboo_0789
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mtp:Mthe_0905 heavy metal translocating P-type ATPase.
  
 
 0.494
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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