STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1641PFAM: TOBE domain protein; KEGG: mma:MM0224 molybdenum-pterin-binding-protein. (69 aa)    
Predicted Functional Partners:
Mboo_1335
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: mhu:Mhun_0110 CheA signal transduction histidine kinases.
    
   0.710
Mboo_0731
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mhu:Mhun_0091 4Fe-4S ferredoxin, iron-sulfur binding.
  
  
 0.700
Mboo_0890
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: mhu:Mhun_2010 molybdenum ABC transporter, periplasmic molybdate-binding protein.
 
  
 0.666
Mboo_2372
Hypothetical protein.
  
  
 0.595
Mboo_2460
TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: mhu:Mhun_2470 molybdopterin binding domain.
   
 
 0.572
Mboo_1139
PFAM: 4-oxalocrotonate tautomerase; KEGG: rme:Rmet_0808 4-oxalocrotonate tautomerase family enzyme.
  
    0.556
moaA
Putative molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
     
 0.549
moaC
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
     
 0.515
Mboo_1082
PFAM: 4-oxalocrotonate tautomerase; KEGG: ana:asr0697 probable 4-oxalocrotonate tautomerase.
   
    0.485
Mboo_2128
TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: mtp:Mthe_0009 MoaD family protein.
     
 0.460
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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