Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mboo_1663Methyltransferase type 11; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mhu:Mhun_0834 UbiE/COQ5 methyltransferase. (243 aa)    
Predicted Functional Partners:
rps5
Ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy.
    
 0.786
Mboo_1665
PFAM: Protein of unknown function DUF137; KEGG: mhu:Mhun_0832 hypothetical protein.
       0.780
Mboo_1666
PFAM: GHMP kinase; KEGG: mhu:Mhun_0831 GHMP kinase.
       0.780
Mboo_1664
KEGG: mhu:Mhun_0833 replication factor C subunit.
     
 0.774
Mboo_1667
TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: mhu:Mhun_0830 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase.
     
 0.709
Mboo_1668
PFAM: protein of unknown function Met10; KEGG: mhu:Mhun_0829 protein of unknown function Met10.
  
 
 0.701
Mboo_1123
PFAM: NADH-ubiquinone oxidoreductase, chain 49kDa; NADH dehydrogenase (ubiquinone), 30 kDa subunit; KEGG: mma:MM1063 formate hydrogenlyase subunit 5 precursor.
  
 0.684
Mboo_1669
NMD3; PFAM: NMD3; KEGG: mhu:Mhun_0828 NMD3.
  
  
 0.671
rps9
PFAM: ribosomal protein S9; KEGG: mhu:Mhun_2896 ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 0.661
Mboo_0378
KEGG: mma:MM2469 hypothetical protein.
  
 0.658
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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