STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1667TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: mhu:Mhun_0830 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase. (397 aa)    
Predicted Functional Partners:
Mboo_1665
PFAM: Protein of unknown function DUF137; KEGG: mhu:Mhun_0832 hypothetical protein.
 
  
 0.988
Mboo_1837
TIGRFAM: cytidyltransferase-related domain; PFAM: cytidylyltransferase; KEGG: mhu:Mhun_0620 cytidyltransferase-related.
    
 0.916
Mboo_1666
PFAM: GHMP kinase; KEGG: mhu:Mhun_0831 GHMP kinase.
 
   
 0.906
Mboo_1670
PFAM: Protein of unknown function DUF424; KEGG: mhu:Mhun_0827 protein of unknown function DUF424.
 
     0.876
Mboo_0056
PFAM: aminotransferase, class I and II; KEGG: mhu:Mhun_2478 aminotransferase, class I and II.
  
  0.868
Mboo_1200
PFAM: aminotransferase, class I and II; KEGG: mhu:Mhun_0911 aminotransferase, class I and II.
  
  0.868
Mboo_1668
PFAM: protein of unknown function Met10; KEGG: mhu:Mhun_0829 protein of unknown function Met10.
  
    0.864
Mboo_1669
NMD3; PFAM: NMD3; KEGG: mhu:Mhun_0828 NMD3.
       0.836
Mboo_1991
Cystathionine gamma-lyase; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cystathionine gamma-lyase.
  
 
  0.835
Mboo_0420
TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: mba:Mbar_A2422 cysteine synthase.
    
 0.825
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.