STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1688TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mtp:Mthe_0084 ammonium transporter. (399 aa)    
Predicted Functional Partners:
Mboo_1695
PFAM: nitrogen regulatory protein P-II; KEGG: mhu:Mhun_2505 nitrogen regulatory protein P-II (GlnB, GlnK).
 
 
 0.990
Mboo_1685
PFAM: nitrogen regulatory protein P-II; KEGG: afu:AF1750 nitrogen regulatory protein P-II (GlnB-3); Belongs to the P(II) protein family.
 
 
 0.925
Mboo_0297
PFAM: nitrogen regulatory protein P-II; KEGG: mhu:Mhun_2505 nitrogen regulatory protein P-II (GlnB, GlnK); Belongs to the P(II) protein family.
 
 
 0.900
Mboo_0435
PFAM: nitrogen regulatory protein P-II; KEGG: mtp:Mthe_0085 nitrogen regulatory protein P-II.
  
 
 0.897
Mboo_0436
PFAM: nitrogen regulatory protein P-II; KEGG: mac:MA1211 P-II family nitrogen regulatory protein; Belongs to the P(II) protein family.
  
 
 0.893
Mboo_0437
PFAM: nitrogen regulatory protein P-II; KEGG: mth:MTH1561 nitrogen fixation nifhd region glnb-like protein 1.
  
 
 0.893
Mboo_1143
PFAM: nitrogen regulatory protein P-II; KEGG: det:DET1157 nitrogen regulatory protein P-II.
  
 
 0.893
Mboo_1144
PFAM: nitrogen regulatory protein P-II; KEGG: dvu:DVUA0013 nitrogen regulatory protein P-II.
  
 
 0.893
Mboo_1689
KEGG: mhu:Mhun_0779 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase, catalytic region; glutamine synthetase, beta-Grasp.
  
  
 0.721
Mboo_0782
Multi-sensor signal transduction histidine kinase; KEGG: mhu:Mhun_1958 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: extracellular solute-binding protein, family 3; ATP-binding region, ATPase domain protein domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.627
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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