STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1748PFAM: glycosyl transferase, family 2; KEGG: mba:Mbar_A0235 glycosyl transferase. (300 aa)    
Predicted Functional Partners:
Mboo_1750
dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mhu:Mhun_3073 dTDP-4-dehydrorhamnose reductase.
 
  
 0.846
Mboo_1751
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.755
Mboo_1749
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mhu:Mhun_3072 dTDP-glucose 4,6-dehydratase.
 
  
 0.745
Mboo_1761
PFAM: ABC-2 type transporter; KEGG: sus:Acid_4640 ABC-2 type transporter.
  
  
 0.659
Mboo_1982
KEGG: mac:MA2721 serine O-acetyltransferase / hypothetical protein (multi-domain); TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; protein of unknown function DUF59.
 
   
 0.616
Mboo_2450
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase, family 2; GtrA family protein; KEGG: pfu:PF0058 dolichol monophosphate mannose synthase.
  
  
 0.555
Mboo_2443
KEGG: mhu:Mhun_3065 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
  
  
 0.543
Mboo_1760
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chu:CHU_0848 polysaccharide ABC transporter, ATPase component.
 
  
 0.532
Mboo_1752
TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mhu:Mhun_3075 glucose-1-phosphate thymidylyltransferase.
  
  
 0.527
Mboo_1335
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: mhu:Mhun_0110 CheA signal transduction histidine kinases.
    
   0.520
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.