STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1832PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: mma:MM1154 NDP-N-acetyl-D-galactosaminuronic acid dehydrogenase. (476 aa)    
Predicted Functional Partners:
Mboo_1834
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mhu:Mhun_2142 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.967
Mboo_1833
PFAM: oxidoreductase domain protein; CoA-binding domain protein; KEGG: mhu:Mhun_2141 oxidoreductase-like.
 
  
 0.916
Mboo_1749
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mhu:Mhun_3072 dTDP-glucose 4,6-dehydratase.
 
  
 0.758
Mboo_1766
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: mtp:Mthe_1079 NAD-dependent epimerase/dehydratase.
  
 0.703
Mboo_1982
KEGG: mac:MA2721 serine O-acetyltransferase / hypothetical protein (multi-domain); TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; protein of unknown function DUF59.
  
  
 0.679
Mboo_2450
Dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase, family 2; GtrA family protein; KEGG: pfu:PF0058 dolichol monophosphate mannose synthase.
  
  
 0.587
hisH
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
  
  
 0.580
Mboo_2443
KEGG: mhu:Mhun_3065 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein.
 
   
 0.571
Mboo_1538
PFAM: glycosyl transferase, group 1; KEGG: mhu:Mhun_1784 glycosyl transferase, group 1.
 
  
 0.570
Mboo_0251
PFAM: transferase hexapeptide repeat containing protein; KEGG: mhu:Mhun_2143 transferase hexapeptide repeat.
 
   
 0.568
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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