STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1970PFAM: protein kinase; periplasmic copper-binding; SMART: tyrosine protein kinase; serine/threonine protein kinase; Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: mhu:Mhun_0317 serine/threonine protein kinase. (707 aa)    
Predicted Functional Partners:
Mboo_0438
PFAM: protein phosphatase 2C domain protein; KEGG: mmc:Mmcs_0019 protein serine/threonine phosphatases.
 
 0.953
Mboo_2232
PFAM: GTP-binding protein, HSR1-related; KEGG: mhu:Mhun_2908 small GTP-binding protein domain.
  
 0.870
Mboo_1510
KEGG: ttj:TTHA1595 protein serine/threonine phosphatase.
   
 0.852
Mboo_0795
Putative PAS/PAC sensor protein; KEGG: mhu:Mhun_1353 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
   
 0.788
Mboo_1949
Putative PAS/PAC sensor protein; KEGG: mhu:Mhun_1353 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: TPR repeat-containing protein; response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein.
   
 0.788
Mboo_0405
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP3577 FabG3_2.
   
 0.785
Mboo_1745
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: mhu:Mhun_3155 short-chain dehydrogenase/reductase SDR.
   
 0.785
Mboo_0275
PFAM: phosphoribulokinase/uridine kinase; KEGG: mhu:Mhun_0794 phosphoribulokinase/uridine kinase.
  
 0.765
Mboo_0460
PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mtp:Mthe_0045 peptidylprolyl isomerase.
   
 
 0.746
Mboo_0461
PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: mtp:Mthe_0045 peptidylprolyl isomerase.
   
 
 0.746
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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