STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_2132PFAM: Protein of unknown function DUF1628; KEGG: sfu:Sfum_0670 hypothetical protein. (646 aa)    
Predicted Functional Partners:
Mboo_2133
KEGG: mhu:Mhun_2428 hypothetical protein.
       0.782
Mboo_1304
KEGG: mma:MM2386 hypothetical protein.
 
    0.463
Mboo_1627
KEGG: mtp:Mthe_1696 hypothetical protein.
   
    0.455
Mboo_1636
PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: mhu:Mhun_0171 iron-containing alcohol dehydrogenase.
  
    0.434
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.