STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_2205PFAM: ABC-1 domain protein; KEGG: mba:Mbar_A2578 hypothetical protein. (552 aa)    
Predicted Functional Partners:
Mboo_0176
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mhu:Mhun_1110 methyltransferase type 11.
    
 
 0.778
Mboo_0391
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: pen:PSEEN2920 hypothetical protein.
    
 
 0.778
eIF5A
Translation initiation factor eIF-5A; Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family.
    
 0.676
Mboo_1168
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pac:PPA0616 ABC transporter, ATP-binding protein.
      0.533
Mboo_2206
KEGG: mhu:Mhun_3051 methyltransferase DNA modification enzyme.
       0.522
hemL
TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: mhu:Mhun_2560 glutamate-1-semialdehyde-2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
      0.496
Mboo_1667
TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: mhu:Mhun_0830 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase.
  
  
 0.496
Mboo_1381
PFAM: amidohydrolase; KEGG: mhu:Mhun_0849 amidohydrolase.
 
    0.483
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
     
 0.442
Mboo_2336
PFAM: response regulator receiver; KEGG: mhu:Mhun_1724 response regulator receiver domain protein (CheY-like).
     
 0.434
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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