STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_2254PFAM: GCN5-related N-acetyltransferase; KEGG: bcl:ABC1441 acetyltransferase, GNAT family. (190 aa)    
Predicted Functional Partners:
Mboo_0608
PFAM: ribonuclease III; KEGG: lip:LI0571 dsRNA-specific ribonuclease.
 
    0.719
Mboo_0304
PFAM: ribonuclease III; KEGG: mhu:Mhun_1116 ribonuclease III.
  
    0.668
Mboo_1834
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mhu:Mhun_2142 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.620
Mboo_0691
KEGG: mhu:Mhun_1600 hypothetical protein.
 
    0.601
Mboo_1982
KEGG: mac:MA2721 serine O-acetyltransferase / hypothetical protein (multi-domain); TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; protein of unknown function DUF59.
  
  
 0.601
Mboo_0306
PFAM: GCN5-related N-acetyltransferase; isochorismatase hydrolase; KEGG: gme:Gmet_2952 isochorismatase hydrolase.
 
   
 0.519
Mboo_2255
KEGG: mhu:Mhun_0242 daunorubicin resistance ABC transporter ATP-binding subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.502
Mboo_2256
PFAM: ABC-2 type transporter; KEGG: mtp:Mthe_1227 ABC-2 type transporter.
       0.502
Mboo_1765
TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mhu:Mhun_3079 UTP-glucose-1-phosphate uridylyltransferase.
  
  
 0.486
Mboo_1751
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.481
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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