STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_2279PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mba:Mbar_A3305 iron-sulfur flavoprotein. (221 aa)    
Predicted Functional Partners:
Mboo_2280
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aor:AO090005000990 predicted protein Pfam: Zn_clus Methyltransf_11 Methyltransf_12 PROSITE: ZN2_CY6_FUNGAL_1 ZN2_CY6_FUNGAL_2.
       0.589
Mboo_2277
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2015 ABC transporter ATP-binding protein.
   
 
 0.529
Mboo_2278
PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bfr:BF3144 ABC transporter ATP-binding protein.
   
 
 0.529
Mboo_2281
KEGG: gsu:GSU1549 lipoprotein, putative.
       0.448
Mboo_0557
PFAM: protein of unknown function DUF106, transmembrane; KEGG: mhu:Mhun_2228 protein of unknown function DUF106, transmembrane.
   
    0.416
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.