STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_2323PFAM: TrkA-N domain protein; KEGG: mhu:Mhun_2072 TrkA-N. (549 aa)    
Predicted Functional Partners:
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.742
Mboo_2322
PFAM: PP-loop domain protein; KEGG: mba:Mbar_A2672 hypothetical protein.
  
    0.648
kdpC
Potassium-transporting ATPase, A subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex; Belongs to the KdpA family.
  
  
 0.636
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
  
    0.492
Mboo_2320
PFAM: Protein of unknown function DUF460; KEGG: mhu:Mhun_2604 protein of unknown function DUF460.
       0.464
Mboo_2321
PFAM: protein of unknown function RIO1; KEGG: mhu:Mhun_2603 protein of unknown function RIO1.
       0.455
Mboo_1300
PFAM: MscS Mechanosensitive ion channel; KEGG: mhu:Mhun_1569 MscS mechanosensitive ion channel.
 
  
 0.416
Mboo_1944
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: nph:NP6110A trk-type transport system (probable substrate potassium) 2, NAD-binding subunit.
 
   
 0.406
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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