STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_2341Hypothetical protein. (105 aa)    
Predicted Functional Partners:
rlmH
Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA.
       0.605
pgk-2
PFAM: phosphoglycerate kinase; KEGG: mhu:Mhun_1194 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
       0.548
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.518
atpB
ATP synthase, B subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
       0.518
atpA
ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.518
atpF
Vacuolar H+-transporting two-sector ATPase, F subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.518
atpC
H+-transporting two-sector ATPase, C (AC39) subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.518
atpE
H+-transporting two-sector ATPase, E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
       0.482
Mboo_2349
PFAM: H+-transporting two-sector ATPase, C subunit; KEGG: mhu:Mhun_1179 H+-transporting two-sector ATPase, C subunit.
       0.468
Mboo_2350
PFAM: V-type ATPase, 116 kDa subunit; KEGG: mhu:Mhun_1178 V-type ATPase, 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family.
       0.468
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.