STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABZ98661.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (210 aa)    
Predicted Functional Partners:
ABZ98662.1
Putative small conductance mechanosensitive ion channel; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
 
     0.793
ABZ99554.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.774
aroB2
3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).
       0.730
ABZ98664.1
Putative ADP-ribose pyrophosphatase, NudF subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
       0.730
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
       0.730
ABZ98742.1
Putative outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
 
   0.684
ABZ98598.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.659
acpP
Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
       0.651
ABZ99303.1
Putative outer-membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.
  
 
   0.571
ABZ99691.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.545
Your Current Organism:
Leptospira biflexa
NCBI taxonomy Id: 456481
Other names: L. biflexa serovar Patoc strain 'Patoc 1 (Paris)', Leptospira biflexa serovar Patoc str. ATCC 23582, Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)', Leptospira biflexa serovar Patoc strain Patoc 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.