STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABZ99121.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the LOG family. (197 aa)    
Predicted Functional Partners:
ABZ99122.1
Hypothetical protein; No homology to any previously reported sequences.
       0.787
ABZ99120.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.778
hemK
Modification methylase HemK; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      0.651
ABZ99119.1
Putative L-threonine 3-dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.648
ABZ99118.1
Hypothetical protein; No homology to any previously reported sequences.
  
    0.526
nrdA
Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide reductase); Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
    0.475
gltB
Glutamate synthase large chain precursor; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.413
Your Current Organism:
Leptospira biflexa
NCBI taxonomy Id: 456481
Other names: L. biflexa serovar Patoc strain 'Patoc 1 (Paris)', Leptospira biflexa serovar Patoc str. ATCC 23582, Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)', Leptospira biflexa serovar Patoc strain Patoc 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.