STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrB-2Putative peptide methionine sulphoxide reductase (MsrB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (175 aa)    
Predicted Functional Partners:
msrA2
Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.976
msrA1
Peptide methionine sulfoxide reductase MsrA (Protein-methionine-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 0.975
ABZ99740.1
Putative two-component sensor histidine kinase; Function of strongly homologous gene; regulator.
     
 0.686
ABZ97062.1
Putative protein-disulfide reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.672
dsbD
Thiol:disulfide interchange protein DsbD (precursor); Protein-disulfide reductase; Disulfide reductase; C-type cytochrome biogenesis protein cycZ); putative membrane protein; Function of homologous gene experimentally demonstrated in an other organism; membrane component.
   
 
 0.667
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.484
fumA
Fumarate hydratase class I, aerobic (Fumarase); Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
  
 0.481
ABZ96393.1
Hypothetical protein; No homology to any previously reported sequences.
   
 0.453
ABZ97273.1
Putative thiol-disulfide isomerase and thioredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier.
   
 0.453
ABZ97746.1
Putative thioredoxin-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.453
Your Current Organism:
Leptospira biflexa
NCBI taxonomy Id: 456481
Other names: L. biflexa serovar Patoc strain 'Patoc 1 (Paris)', Leptospira biflexa serovar Patoc str. ATCC 23582, Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)', Leptospira biflexa serovar Patoc strain Patoc 1
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