STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A077S6E3LRRNT_2 domain-containing protein. (270 aa)    
Predicted Functional Partners:
A0A1D5YNP5
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.881
A0A3B6AVD3
Small nuclear ribonucleoprotein G.
    
  0.832
A0A3B6C2M0
Small nuclear ribonucleoprotein G.
    
  0.832
A0A1D6BMH1
Sm domain-containing protein.
    
  0.749
A0A3B6PLA3
Sm domain-containing protein.
    
  0.749
A0A3B6QFE6
Sm domain-containing protein.
    
  0.749
A0A3B6AYJ7
Small nuclear ribonucleoprotein-associated protein.
    
 0.712
A0A3B6C7U9
Small nuclear ribonucleoprotein-associated protein.
    
 0.712
A0A3B6DFE2
Small nuclear ribonucleoprotein-associated protein.
    
 0.712
W5BZM2_WHEAT
Uncharacterized protein.
    
  0.711
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.