STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B5ZUX3Uncharacterized protein. (508 aa)    
Predicted Functional Partners:
W5C4N7_WHEAT
Uncharacterized protein.
    
 0.936
A0A3B6KDJ1
Uncharacterized protein.
    
 0.931
A0A3B6LEY3
Uncharacterized protein.
    
 0.931
A0A3B6ML15
Uncharacterized protein.
    
 0.931
A0A3B6ATN6
Spt4 domain-containing protein.
    
 0.929
A0A3B6C2C4
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.929
A0A3B6ASI2
Uncharacterized protein.
    
  0.920
A0A3B6C0M6
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.920
A0A3B6TP75
Uncharacterized protein.
    
  0.920
W5C596_WHEAT
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.920
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.