STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6CE91RBR-type E3 ubiquitin transferase. (589 aa)    
Predicted Functional Partners:
A0A077S011
E2_bind domain-containing protein.
   
 
  0.621
A0A3B6EEE4
E2_bind domain-containing protein.
   
 
  0.621
A0A3B6GQ86
E2_bind domain-containing protein.
   
 
  0.621
A0A077RXT3
Uncharacterized protein.
     
 0.597
A0A3B6DEB7
Uncharacterized protein.
     
 0.597
ATG7c
Autophagy-related protein 7c.
     
 0.597
ATG7b
Autophagy-related protein 7b.
     
 0.597
A0A3B5ZRN7
DUF4220 domain-containing protein.
     
 0.538
A0A3B6B294
Uncharacterized protein.
     
 0.538
A0A3B6CA48
Uncharacterized protein.
     
 0.538
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.