STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6EEK9Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
A0A3B6FWD7
Pectate lyase.
     
 0.932
A0A3B5Y556
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
  
  
 
0.891
A0A3B5XYU7
Pectate lyase.
     
 0.881
A0A3B5YW82
Pectate lyase.
     
 0.881
A0A3B5ZTL0
Pectate lyase.
     
 0.881
A0A1D5V059
Pectate lyase.
     
 0.876
A0A3B6AQB7
Pectate lyase.
     
 0.876
A0A3B6BX63
Pectate lyase.
     
 0.876
A0A3B5ZTD0
Pectinesterase domain-containing protein.
     
 0.873
W4ZTR0_WHEAT
Pectinesterase domain-containing protein.
     
 0.873
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.