STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6EKD2RING-type domain-containing protein. (899 aa)    
Predicted Functional Partners:
A0A3B6B204
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.879
A0A3B6NUR7
Peptidylprolyl isomerase.
    
 
 0.872
A0A3B6PQ18
Peptidylprolyl isomerase.
    
 
 0.872
A0A3B6QLD3
Peptidylprolyl isomerase.
    
 
 0.872
W5E8X2_WHEAT
Uncharacterized protein.
   
   0.864
A0A1D5RRD3
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
   0.857
A0A2X0SNJ0
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.850
A0A3B6AXG0
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.850
A0A3B6C521
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.850
W5FEZ3_WHEAT
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.850
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.