STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6JFS6Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (1006 aa)    
Predicted Functional Partners:
A0A3B6HP67
TPR_REGION domain-containing protein.
   
 0.956
A0A3B6IUW4
TPR_REGION domain-containing protein.
   
 0.956
A0A3B6JJM6
TPR_REGION domain-containing protein.
   
 0.956
A0A3B6PR72
Uncharacterized protein.
   
 0.955
A0A3B6QJ67
Uncharacterized protein.
   
 0.955
A0A3B6UAY8
Uncharacterized protein.
   
 0.955
A0A3B6KAP9
ANAPC5 domain-containing protein.
   
 0.953
A0A3B6LFF3
ANAPC5 domain-containing protein.
   
 0.953
A0A3B6ML53
ANAPC5 domain-containing protein.
   
 0.953
A0A3B5Y0G9
APC1_C domain-containing protein.
    
 0.952
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.