STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6JLR0Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis. (284 aa)    
Predicted Functional Partners:
A0A3B5XVP6
Uncharacterized protein.
   
  
 0.829
A0A3B5YTJ3
Uncharacterized protein.
   
  
 0.829
A0A3B5ZRW0
Uncharacterized protein.
   
  
 0.829
A0A3B6I1R3
Uncharacterized protein.
   
  
 0.829
A0A3B6IJ65
Uncharacterized protein.
   
  
 0.829
A0A3B6JDE8
Uncharacterized protein.
   
  
 0.829
A0A2X0SA24
Uncharacterized protein.
   
  
 0.795
A0A3B6B3R3
Uncharacterized protein.
   
  
 0.795
A0A3B6CE23
Uncharacterized protein.
   
  
 0.795
A0A3B6EMU6
RIO domain-containing protein.
   
  
 0.741
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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