STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6KJ07RBR-type E3 ubiquitin transferase. (387 aa)    
Predicted Functional Partners:
W5A9E1_WHEAT
Ubiquitin-like domain-containing protein.
    
 0.916
W5ADS2_WHEAT
Ubiquitin-like domain-containing protein.
    
 0.916
A0A1D6DKE6
Ubiquitin-like domain-containing protein.
    
 0.909
A0A1D6RNK4
RBR-type E3 ubiquitin transferase.
    
0.650
A0A3B6B1I3
RBR-type E3 ubiquitin transferase.
    
0.650
A0A3B6C911
RBR-type E3 ubiquitin transferase.
    
0.650
A0A3B6EIX3
Uncharacterized protein.
    
 0.650
A0A3B6FPH5
Uncharacterized protein.
    
 0.650
A0A3B6GVJ2
Uncharacterized protein.
    
 0.650
A0A3B6HPA6
RBR-type E3 ubiquitin transferase.
    
0.650
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.