STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6RCK6Uncharacterized protein. (699 aa)    
Predicted Functional Partners:
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.991
A0A1D5YNP5
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.991
W5HPH0_WHEAT
Sm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing.
    
 0.991
A0A3B6RIT4
Tr-type G domain-containing protein.
   
 0.989
A0A3B6SNB4
Tr-type G domain-containing protein.
   
 0.989
A0A3B6TNH8
Tr-type G domain-containing protein.
   
 0.989
A0A341Q074
Nop domain-containing protein.
   
 0.988
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
    
 0.988
A0A3B5Z378
Nop domain-containing protein.
   
 0.988
A0A3B6AVD3
Small nuclear ribonucleoprotein G.
    
 0.988
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.