STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6SEG4Uncharacterized protein. (925 aa)    
Predicted Functional Partners:
A0A3B6AWK0
WD_REPEATS_REGION domain-containing protein.
   
  
 0.895
A0A3B6HZM2
WD_REPEATS_REGION domain-containing protein.
   
  
 0.895
A0A3B6IYI6
WD_REPEATS_REGION domain-containing protein.
   
  
 0.895
A0A3B5Y4C6
Uncharacterized protein.
   
    0.877
A0A3B5Z1S8
Uncharacterized protein.
   
    0.877
A0A3B5ZYT1
Uncharacterized protein.
   
    0.877
A0A3B6RNY3
WD_REPEATS_REGION domain-containing protein.
   
    0.875
A0A3B6SU46
WD_REPEATS_REGION domain-containing protein.
   
    0.875
A0A3B6TZ39
WD_REPEATS_REGION domain-containing protein.
   
    0.875
A0A3B6HNP9
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
    0.871
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.