STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS83979.1Transposon Tn7 transposition protein TnsC. (474 aa)    
Predicted Functional Partners:
ANS83981.1
Required for Tn7 transposition. Forms the transposase, together with TnsB. TnsA executes the 5'-DNA strand breakage reaction. TnsABC and TnsD promote high-frequency insertion of Tn7 into a specific target site known as ATT-Tn7 whereas TnsABC and TnsD promote low-frequency insertion into many different sites.
 
 
 
 0.989
ANS83980.1
Sequence-specific, DNA-binding protein required for Tn7 transposition. Recognizes sequences necessary for recombination at both left and right ends of Tn7 and, together with TnsA, forms the transposase. TnsB executes the 5'-DNA strand breakage and joining reactions; Contains 1 integrase catalytic domain.
 
 
 0.973
ANS83978.1
Hypothetical protein.
 
   
 0.929
ANS85339.1
Hypothetical protein.
 
     0.707
ANS86792.1
Hypothetical protein.
  
     0.692
ANS87824.1
Hypothetical protein.
  
     0.595
ANS87803.1
Hypothetical protein.
  
     0.591
ANS83982.1
Uncharacterized protein; To E. coli YhiN.
 
     0.565
ANS86555.1
Hypothetical protein.
  
     0.548
ANS86204.1
Hypothetical protein.
  
     0.460
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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