STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS84253.1Hypothetical protein. (313 aa)    
Predicted Functional Partners:
ANS84254.1
Hypothetical protein.
 
 
 0.990
ANS84257.1
Fimbrial assembly protein PilQ; Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a 'porthole' allowing passage of the fimbrae through the outer membrane. Belongs to the GSP D family.
 
 
 0.978
ANS84255.1
Hypothetical protein.
 
 
 0.969
ANS84256.1
Hypothetical protein.
 
 
 0.943
ANS84384.1
Hypothetical protein.
  
 
 0.875
ANS84078.1
Hypothetical protein.
    
   0.648
mrcA
Penicillin-binding protein 1A; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) (By similarity); In the N-terminal sectio; belongs to the glycosyltransferase 51 family; In the C-terminal sectio; belongs to the transpeptidase family; KEGG: ddc:Dd586_3807 penicillin-binding protein 1A; Hexosyltransferases.
 
   
 0.616
ANS86504.1
Involved in the translocation of the type IV pilin. Belongs to the GSP F family.
 
 
 
 0.577
ANS84374.1
Twitching mobility protein; May be involved in pilus retraction. Belongs to the GSP E family.
 
   
 0.561
gspO
Type 4 prepilin-like protein leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
  
 0.560
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.