Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANS84108.1 | ANS84253.1 | VSVS12_00291 | VSVS12_00436 | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | Hypothetical protein. | 0.524 |
| ANS84108.1 | ANS84255.1 | VSVS12_00291 | VSVS12_00438 | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | Hypothetical protein. | 0.457 |
| ANS84108.1 | ANS84257.1 | VSVS12_00291 | VSVS12_00440 | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | Fimbrial assembly protein PilQ; Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a 'porthole' allowing passage of the fimbrae through the outer membrane. Belongs to the GSP D family. | 0.638 |
| ANS84108.1 | ANS84374.1 | VSVS12_00291 | VSVS12_00577 | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | Twitching mobility protein; May be involved in pilus retraction. Belongs to the GSP E family. | 0.802 |
| ANS84108.1 | ANS84375.1 | VSVS12_00291 | VSVS12_00578 | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | Uncharacterized protein; Belongs to the GSP E family. | 0.786 |
| ANS84108.1 | ANS84390.1 | VSVS12_00291 | VSVS12_00593 | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | Type IV pilus assembly protein PilF; Involved in the translocation of the type IV pilin. Belongs to the GSP E family. | 0.931 |
| ANS84108.1 | gspO | VSVS12_00291 | VSVS12_02765 | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | Type 4 prepilin-like protein leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.857 |
| ANS84253.1 | ANS84108.1 | VSVS12_00436 | VSVS12_00291 | Hypothetical protein. | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | 0.524 |
| ANS84253.1 | ANS84255.1 | VSVS12_00436 | VSVS12_00438 | Hypothetical protein. | Hypothetical protein. | 0.969 |
| ANS84253.1 | ANS84257.1 | VSVS12_00436 | VSVS12_00440 | Hypothetical protein. | Fimbrial assembly protein PilQ; Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a 'porthole' allowing passage of the fimbrae through the outer membrane. Belongs to the GSP D family. | 0.978 |
| ANS84253.1 | ANS84374.1 | VSVS12_00436 | VSVS12_00577 | Hypothetical protein. | Twitching mobility protein; May be involved in pilus retraction. Belongs to the GSP E family. | 0.561 |
| ANS84253.1 | ANS84375.1 | VSVS12_00436 | VSVS12_00578 | Hypothetical protein. | Uncharacterized protein; Belongs to the GSP E family. | 0.530 |
| ANS84253.1 | ANS84390.1 | VSVS12_00436 | VSVS12_00593 | Hypothetical protein. | Type IV pilus assembly protein PilF; Involved in the translocation of the type IV pilin. Belongs to the GSP E family. | 0.535 |
| ANS84253.1 | ANS84393.1 | VSVS12_00436 | VSVS12_00596 | Hypothetical protein. | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins; Belongs to the GSP F family. | 0.545 |
| ANS84253.1 | ANS86504.1 | VSVS12_00436 | VSVS12_02764 | Hypothetical protein. | Involved in the translocation of the type IV pilin. Belongs to the GSP F family. | 0.577 |
| ANS84253.1 | gspO | VSVS12_00436 | VSVS12_02765 | Hypothetical protein. | Type 4 prepilin-like protein leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.560 |
| ANS84255.1 | ANS84108.1 | VSVS12_00438 | VSVS12_00291 | Hypothetical protein. | Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins (By similarity). Required for secretion of cholera toxin through the outer membrane; Belongs to the GSP F family; overlaps another CDS with the same product name. | 0.457 |
| ANS84255.1 | ANS84253.1 | VSVS12_00438 | VSVS12_00436 | Hypothetical protein. | Hypothetical protein. | 0.969 |
| ANS84255.1 | ANS84257.1 | VSVS12_00438 | VSVS12_00440 | Hypothetical protein. | Fimbrial assembly protein PilQ; Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a 'porthole' allowing passage of the fimbrae through the outer membrane. Belongs to the GSP D family. | 0.984 |
| ANS84255.1 | ANS84374.1 | VSVS12_00438 | VSVS12_00577 | Hypothetical protein. | Twitching mobility protein; May be involved in pilus retraction. Belongs to the GSP E family. | 0.542 |
page 1 of 5