Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANS84689.1 | ANS84690.1 | VSVS12_00901 | VSVS12_00902 | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain. | 0.999 |
| ANS84689.1 | ANS84693.1 | VSVS12_00901 | VSVS12_00905 | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | Hypothetical protein. | 0.407 |
| ANS84689.1 | gmhB | VSVS12_00901 | VSVS12_00904 | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase; Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position; Belongs to the GmhB family; KEGG: vch:VC0908 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase. | 0.483 |
| ANS84689.1 | metF | VSVS12_00901 | VSVS12_00366 | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | Methylenetetrahydrofolate reductase required to generate the methyl groups necessary for methionine synthetase to convert homocysteine to methionine; Belongs to the methylenetetrahydrofolate reductase family; KEGG: vvu:VV1_1366 methylenetetrahydrofolate reductase (NADPH). | 0.446 |
| ANS84689.1 | metH | VSVS12_00901 | VSVS12_00533 | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.472 |
| ANS84689.1 | metK | VSVS12_00901 | VSVS12_02845 | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.475 |
| ANS84689.1 | metN | VSVS12_00901 | VSVS12_00903 | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| ANS84690.1 | ANS84689.1 | VSVS12_00902 | VSVS12_00901 | Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain. | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | 0.999 |
| ANS84690.1 | ANS84693.1 | VSVS12_00902 | VSVS12_00905 | Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain. | Hypothetical protein. | 0.433 |
| ANS84690.1 | gmhB | VSVS12_00902 | VSVS12_00904 | Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain. | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase; Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position; Belongs to the GmhB family; KEGG: vch:VC0908 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase. | 0.514 |
| ANS84690.1 | metA | VSVS12_00902 | VSVS12_01625 | Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain. | Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family. | 0.686 |
| ANS84690.1 | metF | VSVS12_00902 | VSVS12_00366 | Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain. | Methylenetetrahydrofolate reductase required to generate the methyl groups necessary for methionine synthetase to convert homocysteine to methionine; Belongs to the methylenetetrahydrofolate reductase family; KEGG: vvu:VV1_1366 methylenetetrahydrofolate reductase (NADPH). | 0.507 |
| ANS84690.1 | metN | VSVS12_00902 | VSVS12_00903 | Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.999 |
| ANS84693.1 | ANS84689.1 | VSVS12_00905 | VSVS12_00901 | Hypothetical protein. | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | 0.407 |
| ANS84693.1 | ANS84690.1 | VSVS12_00905 | VSVS12_00902 | Hypothetical protein. | Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane (By similarity); Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily; Contains 1 ABC transmembrane type-1 domain. | 0.433 |
| ANS84693.1 | gmhB | VSVS12_00905 | VSVS12_00904 | Hypothetical protein. | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase; Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position; Belongs to the GmhB family; KEGG: vch:VC0908 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase. | 0.637 |
| ANS84693.1 | metN | VSVS12_00905 | VSVS12_00903 | Hypothetical protein. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.433 |
| ANS85693.1 | metN | VSVS12_01927 | VSVS12_00903 | ATP-binding/permease protein CydD; Somehow involved in the cytochrome D branch of aerobic respiration. Seems to be a component of a transport system (By similarity); Belongs to the ABC transporter superfamily. Cysteine exporter (TC 3. A. 1. 129. 1) family; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.681 |
| ANS85857.1 | metN | VSVS12_02095 | VSVS12_00903 | Proteases secretion ATP-binding protein PrtD; Involved in the secretion of proteases A, B, C and G. Belongs to the ABC transporter superfamily; Contains 1 ABC transmembrane type-1 domain; Contains 1 ABC transporter domain. | Lipoprotein-releasing system ATP-binding protein LolD; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. | 0.475 |
| gmhB | ANS84689.1 | VSVS12_00904 | VSVS12_00901 | D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase; Converts the D-glycero-beta-D-manno-heptose 1,7- bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1- phosphate by removing the phosphate group at the C-7 position; Belongs to the GmhB family; KEGG: vch:VC0908 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase. | Putative D-methionine-binding lipoprotein MetQ; This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system; Belongs to the NlpA lipoprotein family. | 0.483 |
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