STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS84725.1Hypothetical protein; Belongs to the UPF0319 family. (210 aa)    
Predicted Functional Partners:
ANS86086.1
Formate-dependent nitrite reductase complex subunit; Required for formate-dependent nitrite reduction. Not required for the biosynthesis of any of the c-type cytochromes nor for the secretion of the periplasmic cytochromes. Contains 2 TPR repeats.
  
     0.745
ANS87622.1
Inner membrane protein YcdZ; To E. coli YahC.
  
    0.743
ANS86157.1
Belongs to the UPF0253 family.
  
     0.628
ANS84724.1
Chitoporin; Involved in the uptake of chitosugars; Belongs to the Gram-negative porin family.
 
     0.616
ANS84489.1
Belongs to the UPF0231 family.
  
     0.575
ANS85141.1
Belongs to the UPF0304 family.
  
     0.560
ANS88019.1
Hypothetical protein.
  
     0.545
nhaB
Na(+)/H(+) antiporter NhaB; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.
  
     0.531
ANS84088.1
Hypothetical protein.
  
     0.516
ANS86082.1
Hypothetical protein; Probably involved in the transfer of electrons from the quinone pool to the type-c cytochromes. Belongs to the NrfD family.
  
     0.508
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.