STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS84903.1Hypothetical protein. (235 aa)    
Predicted Functional Partners:
ANS84904.1
Photolyase involved in the repair of UV-induced (6-4) lesions in DNA. Catalyzes the photoreactivation of (6-4) pyrimidine-pyrimidone photoproducts by using blue-light energy. Can repair (6-4) photoproducts in ssDNA as well as in dsDNA; Belongs to the iron-sulfur bacterial cryptochrome/photolyase (FeS-BCP) family.
 
   
 0.894
phrB
Deoxyribodipyrimidine photo-lyase; May have a photoreceptor function. Binds DN; probably functions as a transcriptional repressor (By similarity). Has no photolyase activity. Upon purification from either V. cholerae or E. coli an approximately 60 nucleotide RNA is associated with the protein; Belongs to the DNA photolyase class-1 family; Contains 1 photolyase/cryptochrome alpha/beta domain; KEGG: vcx:VAA049_1056 deoxyribodipyrimidine photo-lyase.
 
   
 0.866
aslA
Displays arylsulfatase activity with pseudosubstrates at acidic pH, such as p-nitrocatechol sulfate; Belongs to the sulfatase family; KEGG: shd:SUTH_00506 arylsulfatase.
   
 
 0.617
fabD
[Acyl-carrier-protein] S-malonyltransferase; Belongs to the FabD family; KEGG: ype:YPO1598 (acyl-carrier-protein) S-malonyltransferase.
  
 
 0.579
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family; KEGG: vpa:VPA0812 1-phosphofructokinase.
   
  
 0.556
ANS84906.1
Hypothetical protein.
       0.510
sbcD
Nuclease SbcCD subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
    
 
 0.504
fabF
Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
  
 
 0.491
fabB
Beta-ketoacyl-[acyl-carrier-protein] synthase I; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids (By similarity); Belongs to the beta-ketoacyl-ACP synthases family; KEGG: plu:plu3184 3-oxoacyl-(acyl-carrier-protein) synthase I.
  
 
 0.491
ANS87237.1
Uncharacterized protein; Contains 1 2Fe-2S ferredoxin-type domain; Contains 1 MOSC domain.
   
 
 0.461
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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