STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS85139.1Uncharacterized protein; Belongs to the PrkA family. (644 aa)    
Predicted Functional Partners:
ANS85137.1
Uncharacterized protein; To B. subtilis SpoVR.
 
  
 0.994
ANS85138.1
Belongs to the UPF0229 family.
 
  
 0.993
glgA
Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.655
katE
Catalase; Decomposes hydrogen peroxide into water and oxyge; serves to protect cells from the toxic effects of hydrogen peroxide. Could protect cells in nodules which have a high potential to produce hydrogen peroxide because of the strong reducing conditions required for nitrogen fixation and the action of several proteins. Belongs to the catalase family; KEGG: vha:VIBHAR_05192 catalase.
   
  
 0.564
ANS85632.1
Nutrient stress-induced DNA-binding protein; Involved in protection of chromosomal DNA from damage under nutrient-limited and oxidative stress conditions. Binds heme (By similarity); Belongs to the Dps family.
   
    0.563
wrbA
NAD(P)H dehydrogenase (quinone); It seems to function in response to environmental stress when various electron transfer chains are affected or when the environment is highly oxidizing. It reduces quinones to the hydroquinone state to prevent interaction of the semiquinone with O2 and production of superoxide (By similarity); Belongs to the WrbA family; Contains 1 flavodoxin-like domain; KEGG: vfu:vfu_A01153 NAD(P)H dehydrogenase (quinone).
   
    0.544
ANS85501.1
Protein-ribulosamine 3-kinase; Belongs to the fructosamine kinase family; KEGG: nve:NEMVE_v1g166358 protein-ribulosamine 3-kinase.
   
    0.509
ANS84447.1
Uncharacterized protein; In the C-terminal sectio; belongs to the PhoH family; Contains 1 PINc domain.
   
  
 0.462
rpoS
RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.
  
  
 0.439
ANS85140.1
May serve as a scaffold protein required for the formation of a complex with MrcB/PonB and MltA, this complex could play a role in enlargement and septation of the murein sacculus. Belongs to the MipA/OmpV family.
       0.428
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.