STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS85354.1Transcriptional repressor of the arabinose utilization genes. Also regulates its own expression. Binds to two sequences within the promoters of the araABDLMNPQ-abfA operon and the araE gene, and to one sequence in the araR promoter. Contains 1 HTH gntR-type DNA-binding domain. (237 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; Belongs to the HutI family; KEGG: sau:SA2121 imidazolonepropionase.
 
  
 0.894
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.875
hutH
Histidine ammonia-lyase; Belongs to the PAL/histidase family; KEGG: hch:HCH_04172 histidine ammonia-lyase.
 
  
 0.852
ANS85892.1
Putative HTH-type transcriptional regulator YurK; Contains 1 HTH gntR-type DNA-binding domain.
  
     0.742
ANS87097.1
Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons; Contains 1 HTH gntR-type DNA-binding domain.
  
     0.702
ANS84860.1
Mannosyl-D-glycerate transport/metabolism system repressor MngR; Represses mngA and mngB. Regulates its own expression; Contains 1 HTH gntR-type DNA-binding domain.
  
     0.681
hutG
Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.
 
  
 0.655
ANS85355.1
Sporulation-control protein spo0M; Controls the expression of spo0A and is required to pass the morphological stage 0 of sporulation; Belongs to the spo0M family.
       0.493
ANS87036.1
Putative HTH-type transcriptional regulator YidP; Contains 1 HTH gntR-type DNA-binding domain.
  
   
 0.450
ANS84463.1
Transcriptional repressor for the pyruvate dehydrogenase complex genes aceEF and lpd; Contains 1 HTH gntR-type DNA-binding domain.
  
  
 0.436
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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