STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS85472.1Formate dehydrogenase iron-sulfur subunit; This chain is an electron transfer unit containing 18 cysteine residues, 16 of which occur in four clusters. Contains 3 4Fe-4S ferredoxin-type domains. (202 aa)    
Predicted Functional Partners:
ANS85471.1
Hypothetical protein.
 
 0.998
ANS85473.1
Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family; Contains 1 4Fe-4S Mo/W bis-MGD-type domain; KEGG: vcf:IR04_12795 formate dehydrogenase major subunit.
 
 0.998
fdoG
Formate dehydrogenase; Contains 4 4Fe-4S ferredoxin-type domains; KEGG: vvu:VV2_1360 formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.979
ANS85476.1
Hypothetical protein.
 
  
 0.943
ANS85475.1
Hypothetical protein.
 
  
 0.908
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
frmB
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
     
  0.900
dmsA
Dimethylsulfoxide reductase; Catalyzes the reduction of dimethyl sulfoxide (DMSO) to dimethyl sulfide (DMS). DMSO reductase serves as the terminal reductase under anaerobic conditions, with DMSO being the terminal electron acceptor. Terminal reductase during anaerobic growth on various sulfoxides and N-oxide compounds. Allows E. coli to grow anaerobically on DMSO as respiratory oxidant; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family; Contains 1 4Fe-4S Mo/W bis-MGD-type domain; KEGG: yel:LC20_03833 anaerobic dimethyl sulfoxide reductase subunit A.
 
 
 0.860
torA
Trimethylamine-N-oxide reductase (cytochrome c); Reduces trimethylamine-N-oxide (TMAO) into trimethylamin; an anaerobic reaction coupled to energy-yielding reactions; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family; KEGG: vch:VC1692 trimethylamine-N-oxide reductase (cytochrome c).
 
 
 0.857
fdhD
Protein FdhD like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
   
 0.834
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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