STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS85541.1Lipopolysaccharide core biosynthesis glycosyltransferase LpsE; Belongs to the glycosyltransferase group 1 family. Glycosyltransferase 4 subfamily; KEGG: vfi:VF_A1028 null; Hexosyltransferases. (404 aa)    
Predicted Functional Partners:
ANS85540.1
Hypothetical protein.
 
     0.810
ANS85543.1
Hypothetical protein.
 
  
 0.715
ANS85542.1
Hypothetical protein.
 
   
 0.645
ANS85544.1
Hypothetical protein.
  
  
 0.556
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.553
ANS88031.1
Hypothetical protein.
   
 0.553
ANS85552.1
Undecaprenyl-phosphate glucose phosphotransferase; Involved in the biosynthesis of the exopolysaccharide acetan, a water-soluble polysaccharide involved in production of bacterial cellulose (BC); Belongs to the bacterial sugar transferase family.
 
  
 0.549
ANS85539.1
Member of the two-component regulatory system MtrA/MtrB; Contains 1 OmpR/PhoB-type DNA-binding domain; Contains 1 response regulatory domain.
  
   0.540
baeS
Histidine kinase; Ethylene receptor related to bacterial two-component regulators. Acts as negative regulator of ethylene signaling. May delay the transition from the vegetative stage to the floral stage by upregulating GI (GIGANTEA) and RCN1 and cause starch accumulation in stems by down-regulating the alpha-amylase AMY3D; Belongs to the ethylene receptor family; Contains 1 GAF domain; Contains 1 histidine kinase domain; Contains 1 response regulatory domain; KEGG: mah:MEALZ_3850 two-component system, OmpR family, sensor histidine kinase BaeS.
 
  
 0.529
ANS87826.1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase; Is the initiating enzyme for colanic acid (CA) synthesis. Catalyzes the transfer of the glucose-1-phosphate moiety from UDP-Glc onto the carrier lipid undecaprenyl phosphate (C55-P), forming a phosphoanhydride bond yielding to glucosyl- pyrophosphoryl-undecaprenol (Glc-PP-C55). Also possesses a weak galactose-1-P transferase activity; Belongs to the bacterial sugar transferase family.
  
  
 0.514
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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