STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANS85704.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
ANS87625.1
Belongs to the UPF0312 family. Type 1 subfamily.
 
  
 0.578
msrA
KEGG: vpb:VPBB_A0281 peptide-methionine (S)-S-oxide reductase.
       0.511
nqo1
KEGG: azo:azo1477 NAD(P)H dehydrogenase (quinone).
       0.506
deaD
ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5. 8S rRNAs; Belongs to the DEAD box helicase family. DDX56/DBP9 subfamily; Contains 1 helicase ATP-binding domain; Contains 1 helicase C-terminal domain; KEGG: mvs:MVIS_3808 ATP-dependent RNA helicase DeaD.
       0.482
Your Current Organism:
Vibrio scophthalmi
NCBI taxonomy Id: 45658
Other names: CAIM 75, CECT 4638, CIP 105211, LMG 19158, LMG:19158, V. scophthalmi, strain A089
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.